AGETAZ - an atlas of gene expression in the adult zebrafish brain
The Atlas of Gene Expression in the Telencephalon of Adult Zebrafish (AGETAZ) is an expression atlas of transcription factors (TFs) and transcription related factors expressed in the adult zebrafish (Danio rerio) telencephalon. This database is a follow-up of the fish factor database (FFdb), which is a collection of TF expression patterns in the embryonic zebrafish. AGETAZ aims to map all TFs expressed in the adult telencephalon of this model organism. It provides a fast way to find TFs which are expressed in any telencephalic region that is of interest to you (E-zones). Thus, AGETAZ can be used to identify new markers of distinct nuclei and cell types existing in the zebrafish telencephalon.
You can either browse through the whole dataset, select only one specific gene or search for a gene by its name or identifier from the most common databases. Furthermore, the cluster analysis of gene expression can be utilised to determine co-expressed genes in specific expression domains.
Browse through the whole dataset sorted by gene name, the internal identifier "ita-id" or concentrate only on those genes with a full set of images.
The menu includes all genes present in the AGETAZ dataset. Select your gene of interest to obtain the detailed information contained in the summary page.
Search for the expression pattern of a gene in the adult telencephalon by its name, identifier (Zfin, UniGene, GenBank, RefSeq, Ensembl) or its human ortholog.
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To analyse co-expressed genes in specific regions of the adult zebrafish telencephalon, click the image. |